Publications

Anjeli UG, Sartimbul A, Sulistiyati TD, Yona D, Iranawati F, Seftiyawan FO, Aliviyanti D, Lauro FM, Matallana-Surget S, Fanda AM, Winata VA. (2024) Microplastics contamination in aquaculture-rich regions: A case study in Gresik, East Java, Indonesia. Sci Total Environ. 26;927:171992. doi: 10.1016/j.scitotenv.2024.171992.

Matallana-Surget, S., Geron, A., Decroo, C., and Wattiez, R. (2024). Diel Cycle Proteomics: Illuminating Molecular Dynamics in Purple Bacteria for Optimized Biotechnological Applications. International Journal of Molecular Sciences. 25, no. 5: 2934. https://doi.org/10.3390/ijms25052934

Messer, L.F., Lee, C.E., Wattiez, R. and Matallana-Surget, S. (2024). Novel functional insights into the microbiome inhabiting marine plastic debris: critical considerations to counteract the challenges of thin biofilms using multi-omics and comparative metaproteomics. Microbiome 12, 36 https://doi.org/10.1186/s40168-024-01751-x

Matallana-Surget S, Nigro LM, Waidner LA, Lebaron P, Wattiez R, Werner J, Fraser R, Dimitrov D, Watt R and Jeffrey WH (2024) Clarifying the murk: unveiling bacterial dynamics in response to crude oil pollution, Corexit-dispersant, and natural sunlight in the Gulf of Mexico. Front. Mar. Sci. 10:1337886. doi: 10.3389/fmars.2023.1337886

Bertile, F., Matallana-Surget, S., Tholey, A., Cristobal, S., & Armengaud, J. (2023) Diversifying the concept of model organisms in the age of -omics. Communications Biology. 6:1062 | https://doi.org/10.1038/s42003-023-05458-x

Metcalf, R., Messer, L. F., White ,H. L., Ormsby, M. J., Matallana-Surget, S., & Quilliam, R.S. (2023). Evidence of interspecific plasmid uptake by pathogenic strains of Klebsiella isolated from microplastic pollution on public beaches. Journal of Hazardous Materials 461, 132567 https://dx.doi.org/10.2139/ssrn.4510708

Lee, C., Messer, L., Holland, S., Gutierrez, T., Quilliam, R., & Matallana-Surget, S. (2023). The primary molecular influences of marine plastisphere formation and function: Novel insights into organism -organism and -co-pollutant interactions. Critical Reviews in Environmental Science and Technology, 1-24. https://doi.org/10.1080/10643389.2023.2224182

Augustin, G., Werner, J., & Wattiez, R. & Matallana-Surget, S., (2023). Towards the discovery of novel molecular clocks in Prokaryotes. Critical Reviews in Microbiology, https://doi.org/10.1080/1040841X.2023.2220789

Martínez-Espinosa, R. M., Armengaud, J., Matallana-Surget, S., & Olaya-Abril, A. (2023).Editorial: Environmental omics and their biotechnological applications. Frontiers in Microbiology, 14, 1-3. https://doi.org/10.3389/fmicb.2023.1165558

Omeyer, L. C. M., Duncan, E. M., Aiemsomboon, K., Beaumont, N., Bureekul, S., Cao, B., …Matallana-Surget S et al. (2022). Priorities to inform research on marine plastic pollution in Southeast Asia. Science of the Total Environment, 841, Article 156704. https://doi.org/10.1016/j.scitotenv.2022.156704

Moresco, V., Charatzidou, A., Oliver, D. M., Weidmann, M., Matallana-Surget, S., & Quilliam, R. S. (2022). Binding, recovery, and infectiousness of enveloped and non-enveloped viruses associated with plastic pollution in surface water. Environmental Pollution, 308, Article 119594. https://doi.org/10.1016/j.envpol.2022.119594

Delacuvellerie, A., Ballerini, T., Frère, L., Matallana-Surget, S., Dumontet, B., & Wattiez, R. (2022). From rivers to marine environments: A constantly evolving microbial community within the plastisphere. Marine Pollution Bulletin, 179, Article 113660. https://doi.org/10.1016/j.marpolbul.2022.113660

Géron, A., Werner, J., Lebaron, P., Wattiez, R., & Matallana-Surget, S. (2021). Diel Protein Regulation of Marine Picoplanktonic Communities Assessed by Metaproteomics. Microorganisms, 9(12), Article 2621. https://doi.org/10.3390/microorganisms9122621

Lozano, C., Lebaron, P., & Matallana-Surget, S. (2021). Shedding light on the bacterial resistance to toxic UV filters: A comparative genomic study. PeerJ, 9, Article e12278. https://doi.org/10.7717/peerj.12278

Lozano, C., Lee, C., Wattiez, R., Lebaron, P., & Matallana-Surget, S. (2021). Unraveling the molecular effects of oxybenzone on the proteome of an environmentally relevant marine bacterium. Science of the Total Environment, 793, 148431. https://doi.org/10.1016/j.scitotenv.2021.148431

Moresco, V., Oliver, D. M., Weidmann, M., Matallana-Surget, S., & Quilliam, R. S. (2021). Survival of human enteric and respiratory viruses on plastics in soil, freshwater, and marine environments. Environmental Research, 199, Article 111367. https://doi.org/10.1016/j.envres.2021.111367

Chang, R. L., Stanley, J. A., Robinson, M. C., Sher, J. W., Li, Z., Chan, Y. A., …Matallana-Surget, S. (2020). Protein structure, amino acid composition and sequence determine proteome vulnerability to oxidation-induced damage. EMBO Journal, 39(23), Article e104523. https://doi.org/10.15252/embj.2020104523

Lozano, C., Givens, J., Stien, D., Matallana-Surget, S., & Lebaron, P. (2020). Bioaccumulation and Toxicological Effects of UV-Filters on Marine Species. In A. Tovar-Sánchez, D. Sánchez-Quiles, & J. Blasco (Eds.), Sunscreens in Coastal Ecosystems: Occurrence, Behavior, Effect and Risk (85-130). Cham, Switzerland: Springer. https://doi.org/10.1007/698_2019_442

Lozano, C., Matallana-Surget, S., Givens, J., Nouet, S., Arbuckle, L., Lambert, Z., & Lebaron, P. (2020). Toxicity of UV filters on marine bacteria: Combined effects with damaging solar radiation. Science of the Total Environment, 722, Article 137803. https://doi.org/10.1016/j.scitotenv.2020.137803

Werner, J., Géron, A., Kerssemakers, J., & Matallana-Surget, S. (2019). mPies: a novel metaproteomics tool for the creation of relevant protein databases and automatized protein annotation. Biology Direct, 14(1), Article 21. https://doi.org/10.1186/s13062-019-0253-x

Géron, A., Werner, J., Wattiez, R., Lebaron, P., & Matallana-Surget, S. (2019). Deciphering the Functioning of Microbial Communities: Shedding Light on the Critical Steps in Metaproteomics. Frontiers in Microbiology, 10, Article 2395. https://doi.org/10.3389/fmicb.2019.02395

Matallana-Surget, S., Werner, J., Wattiez, R., Lebaron, K., Intertaglia, L., Regan, C., …Lebaron, P. (2018). Proteogenomic Analysis of Epibacterium Mobile BBCC367, a Relevant Marine Bacterium Isolated From the South Pacific Ocean. Frontiers in Microbiology, 9, Article 3125. https://doi.org/10.3389/fmicb.2018.03125

Perez, V. A., Hengst, M. B., Kurte, L., Dorador, C., Jeffrey, W. H., Wattiez, R., …Matallana-Surget, S. (2017). Bacterial survival under extreme UV radiation: A comparative proteomics study of Rhodobacter sp., isolated from high altitude wetlands in Chile. Frontiers in Microbiology, 8, Article 1173. https://doi.org/10.3389/fmicb.2017.01173

Matallana-Surget, S., Derock, J., Baptiste, L., Badri, H., Deschoenmaeker, F., & Wattiez, R. (2014). Proteome-wide analysis and diel proteomic profiling in the cyanobacterium Arthrospira platensis PCC 8005. PLoS ONE, 9(6), Article e99076. https://doi.org/10.1371/journal.pone.0099076

Matallana-Surget, S., & Wattiez, R. (2013). Impact of Solar Radiation on Gene Expression in Bacteria. Proteomes, 1(2), 70-86. https://doi.org/10.3390/proteomes1020070

Matallana-Surget, S., Cavicchioli, R., Fauconnier, C., Wattiez, R., Baptiste, L., Joux, F., …Lebaron, P. (2013). Shotgun redox proteomics: identification and quantitation of carbonylated proteins in the UVB resistant marine bacterium, Photobacterium angustum S14. PLoS ONE, 8(7), Article e68112. https://doi.org/10.1371/journal.pone.0068112

Baptiste, L., Houyoux, N., Matallana-Surget, S., & Wattiez, R. (2012). Analysis of Isotopic Labelling Vs. Label-Free Approaches for Quantitative Proteomics. In H. Leung, T. Man, & R. Flores (Eds.), Integrative Proteomics (327-346). Croatia: InTech. https://doi.org/10.5772/2473

Matallana-Surget, S., Joux, F., Wattiez, R., & Lebaron, P. (2012). Proteome analysis of the UVB-resistant marine bacterium Photobacterium angustum S14. PLoS ONE, 7(8), Article e42299. https://doi.org/10.1371/journal.pone.0042299

Williams, T., Joux, F., Lauro, F., Matallana-Surget, S., & Cavicchioli, R. (2011). Physiology of marine oligotrophic ultramicrobacteria. In K. Horikoshi, G. Antranikian, A. Bull, F. Robb, & K. Stetter (Eds.), Extremophiles Handbook (1179-1199). Japan: Springer

Matallana-Surget, S., Baptiste, L., & Wattiez, R. (2010). Shotgun proteomics: concept, key points and data mining. Expert Review of Proteomics, 7(1), 5-7. https://doi.org/10.1586/epr.09.101

Matallana-Surget, S., Douki, T., Meador, J., Cavicchioli, R., & Joux, F. (2010). Influence of growth temperature and starvation state on survival and DNA damage induction in the marine bacterium Sphingopyxis alaskensis exposed to UV radiation. Journal of Photochemistry and Photobiology B: Biology, 100(2), 51-56. https://doi.org/10.1016/j.jphotobiol.2010.05.001

Matallana-Surget, S., Joux, F., Raftery, M., & Cavicchioli, R. (2009). The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics. Environmental Microbiology, 11(10), 2660-2675. https://doi.org/10.1111/j.1462-2920.2009.01992.x

Matallana-Surget, S., Douki, T., Cavicchioli, R., & Joux, F. (2009). Remarkable resistance to UVB of the marine bacterium Photobacterium angsutum explained by an unexpected role of photolyase. Photochemical & Photobiological Sciences Photochemical and Photobiological Sciences, 8(9), 1313-1320. https://doi.org/10.1039/B902715G

Abboudi, M., Matallana-Surget, S., Rontani, J., Sempéré, R., & Joux, F. (2008). Physiological alteration of the marine bacterium Vibrio angustum S14 exposed to simulated sunlight during growth. Current Microbiology, 57(5), 412-417. https://doi.org/10.1007/s00284-008-9214-9

Matallana-Surget, S., Meador, J., Joux, F., & Douki, T. (2008). Effect of the GC content of DNA on the distribution of UVB-induced bipyrimidine photoproducts. Photochemical & Photobiological Sciences Photochemical and Photobiological Sciences, 7(7), 794-801. https://doi.org/10.1039/B719929E

Matallana-Surget, S., Joux, F., Lebaron, P., & Cavicchioli, R. (2007). Isolation and characterization of oligotrophic marine bacteria. Journal de la Societe de Biologie, 201(1), 41-50. https://doi.org/10.1051/jbio%3A2007005

Book chapters